Here's a handy way to create rhythmical/pulsating sounds without using the sequencer:
Import and tweak the attached preset to see and hear how it works.
You can modulate the sustain level of ENV1, ENV2 and ENV3 by assigning each envelope's Sustain slider to one of the matrix's user-assignable destinations (column 13, 14, 15 or 16) and then using LFO1, LFO2 or LFO3 as the modulation source. The square and down-sawtooth waveforms work best because they give a sharp attach, though the other LFO waveforms can also produce interesting results.
Obviously, you can use LFO-modulated ENV1 in combination with Env Amt to rhythmically open and close one or both of the filters; you can use LFO-modulated ENV2 to rhythmically vary the VCA volume; and you can route a rhythmically pulsating envelope to any parameter in the matrix.
If you sync the envelope-triggering LFO to the sequencer tempo and tweak its rate, you can get interesting cross-rhythms or polyrhythms.